The BAC table

The genes predicted by the system are indicated in the annotation map as "AutoPredgeneset". For BAC clones 12L3 and 4L14, the autopredicted genes are manually curated and are indicated as "Predgeneset".


Clone NameAccession NoSize(bp)Chromosome No.Link to KAIKObaseIdentified Gene(s)*Other Possible Gene(s)*BAC contig**Dateremark
12L3 AB090308 160,000 1 KAIKObase -- -- -- 2003.11.12 --
4L14 AB090307 160,000 1 KAIKObase -- -- -- 2003.11.12 --
503G12 AP009017 121,370 3 KAIKObase SP-2 prgv0174, N---0655, pg--0064 -- 2005.06.10 B2001-9-A01
503L14 AP009018 142,525 6 KAIKObase -- NV060729, wdS20024 -- 2005.06.10 B2002-9-A01
504B24 AP009019 155,170 24 KAIKObase -- prgv0215, e96h0982, br--0661, wdS00141, wdS00966 -- 2005.06.10 B2003-9-A01
510L24 AP009020 104,504 19 KAIKObase egg specific protein wdS20154 -- 2005.06.10 B2004-9-A01
513O16 AP009021 155,825 22 KAIKObase PTTH mg--0582, mg--0822 -- 2005.06.10 B2005-9-A01
513P13 AP009022 145,045 25 KAIKObase SP-1 -- -- 2005.06.10 B2006-9-A01
514H01 AP009023 140,907 14 KAIKObase Fib-L -- -- 2005.06.10 B2007-9-A01
514J13 AP009024 106,631 10 KAIKObase -- wdS00830, wdS20033, wdS20096, NV021922 -- 2005.06.10 B2008-9-A01
515H16 AP009025 111,903 10 KAIKObase -- prgv0251, msgV0471, N---0013, wdS00227, fbpv0939 -- 2005.06.10 B2009-9-A01
516O13 AP009026 112,414 25 KAIKObase -- NV060052, fbpv0246, msgV0173, N---1084, fbpv0897 -- 2005.06.10 B2010-9-A01
517G19 AP009027 157,022 5 KAIKObase Actin A3, A4 wdS0344, NV021119, NV060463, fbpv0727, e40h0198 -- 2005.06.10 B2011-9-A01
519F15 AP009028 176,330 4 KAIKObase -- N---0567, NV060215, NV021147, e40h0147 -- 2005.06.10 B2012-9-A01
520F12 AP009029 117,574 5 KAIKObase -- msgV0331, fbpv0469, NV060186, NV060453, N---0965 -- 2005.06.10 B2013-9-A01
523E11 AP009030 157,347 8 KAIKObase -- wdS00875, NV021339 -- 2005.06.10 B2014-9-A01
526E16 AP009031 110,996 2 KAIKObase P25 -- -- 2005.06.10 B2015-9-A01
528K11 AP009032 130,115 3 KAIKObase -- N---1035, msgV0022, N---0104, NV060218, e96h0808,wdS20421 -- 2005.06.10 B2016-9-A01
532O09 AP009033 133,041 15 KAIKObase -- N---0090, N---0248 -- 2005.06.10 B2017-9-A01
533C16 AP009034 150,343 12 KAIKObase -- br--0911, mg--0651, N---1017, wdS00483, NV021843, prgv0130 -- 2005.06.10 B2018-9-A01
534E24 AB159447 124,898 13 KAIKObase Supercoiling Factor wdS00199, NV060283, prgv0216, NV060334 -- 2005.06.10 B2019-9-A01
535J11 AP009035 115,715 18 KAIKObase -- prgv0238, prgv0272 -- 2005.06.10 B2020-9-A01
536D15 AP009036 152,645 15 KAIKObase G-tRNA synthase, fbpv0128 N---0908, pg--0021, wdS00081, wdS20064, N---0704 -- 2005.06.10 B2021-9-A01
543G13 AP009037 143,809 27 KAIKObase -- br--0464, wdS00742 -- 2005.06.10 B2023-9-A01
544H24 AB159445 205,107 2 KAIKObase even-skipped -- -- 2005.06.10 B2024-9-A01
544I15 AP009038 134,565 12 KAIKObase e96h0285 e40h0154, NV060251, NV060730, wdS20365, N---0664, NV021976 -- 2005.06.10 B2025-9-A01
550L16 AP009039 131,062 6 KAIKObase -- msgV0015 -- 2005.06.10 B2026-9-A01
551F24 AP009040 113,977 5 KAIKObase -- ceN-0060, wdS20512, N---0022, N---0980, NV060228, prgv0037 -- 2005.06.10 B2027-9-A01
556I11 AP009041 123,910 18 KAIKObase -- wdS00784, NV060801, N---0570 -- 2005.06.10 B2028-9-A01
559G11 AB159446 149,562 11 KAIKObase bombyxin N---0627, NV060365 -- 2005.06.10 B2029-9-A01
009O16 AP008999 155,000 26 KAIKObase -- prgv0044, NV021855, wdS00464, msgV0441 -- 2005.06.10 B2030-9-A01
019F14 AP009006 193,330 1 KAIKObase period -- -- 2005.06.10 B2031-9-A01
004E23 AP008995 200,069 15 KAIKObase Succinyl-CoA ligase alpha-chain mg--0298 -- 2005.06.10 B2032-9-A01
001D20 AP008992 185,921 11 KAIKObase unknown msgV0666 -- 2005.06.10 B2035-9-A01
024J19 AP009009 201,274 4 KAIKObase Dm CG31712 e40h0009 -- 2005.06.10 B2036-9-A01
041P16 AP009013 131,526 4 KAIKObase snRNP protein B (splicing protein) wdV30204 -- 2005.06.10 B2037-9-A01
023I19 AP009008 184,971 4 KAIKObase Dm TCTP heS00290 -- 2005.06.10 B2038-9-A01
001F15 AP008993 167,915 7 KAIKObase v-ATPase E wdS00213 -- 2005.06.10 B2039-9-A01
006H21 AP008996 198,626 8 KAIKObase Dm CG8877 (splicing factor) cesb0094 -- 2005.06.10 B2040-9-A01
032I22 AP009010 187,609 21 KAIKObase Tubulin alpha wdV40225 -- 2005.06.10 B2041-9-A01
007M11 AP008997 152,312 4 KAIKObase Cytochrome B5 pg--0097 -- 2005.06.10 B2042-9-A01
022F01 AP009007 164,370 12 KAIKObase no homology heS30286 -- 2005.06.10 B2043-9-A01
014E18 AP009001 173,544 20 KAIKObase 40S Ribosomal protein S20 wdV30406 -- 2005.06.10 B2044-9-A01
047D02 AP009014 195,130 5 KAIKObase 3-hybroxyacyl-CoA dehybrogenase wdV30131 -- 2005.06.10 B2047-9-A01
039G04 AP009012 189,638 14 KAIKObase Ribosomal protein S16 heS00795 -- 2005.06.10 B2048-9-A01
048C11 AP009015 149,153 17 KAIKObase unknown ce--1103 -- 2005.06.10 B2049-9-A01
018H08 AP009005 160,814 21 KAIKObase unknown msgV0326, br--0454 -- 2005.06.10 B2050-9-A01
009K19 AP008998 236,919 25 KAIKObase C.ele hypothetical protein K08H10.9 prgv0769 -- 2005.06.10 B2051-9-A01
037E23 AP009011 191,091 24 KAIKObase Ferritin H-chain brP-1100 -- 2005.06.10 S2046-9-A01
014M12 AP009002 185,060 9 KAIKObase -- wdS20405 Contig5196 2005.06.10 S2052-9-A01
017C14 AP009004 188,146 9 KAIKObase -- wdS20072 Singleton 2005.06.10 S2053-9-A01
012P08 AP009000 195,041 20 KAIKObase -- e40H0739 Contig4116 2005.06.10 S2054-9-A01
003L20 AP008994 155,325 24 KAIKObase -- wdV40143 Contig543 2005.06.10 S2056-9-A01
015K14 AP009003 180,598 24 KAIKObase -- e96h0228 Singleton 2005.06.10 S2057-9-A01
060O24 AP009016 222,411 20 KAIKObase -- heS00927, heS30603 Contig4116 2005.06.10 S2058-9-A01


Remarks;
* Derived from EST hybridization experimental data
** Constructed by BAC fingerprinting