The BAC table
The genes predicted by the system are indicated in the annotation map as "AutoPredgeneset". For BAC clones 12L3 and 4L14, the autopredicted genes are manually curated and are indicated as "Predgeneset".
Clone Name | Accession No | Size(bp) | Chromosome No. | Link to KAIKObase | Identified Gene(s)* | Other Possible Gene(s)* | BAC contig** | Date | remark |
12L3 |
AB090308 |
160,000 |
1 |
KAIKObase |
-- |
-- |
-- |
2003.11.12 |
-- |
4L14 |
AB090307 |
160,000 |
1 |
KAIKObase |
-- |
-- |
-- |
2003.11.12 |
-- |
503G12 |
AP009017 |
121,370 |
3 |
KAIKObase |
SP-2 |
prgv0174, N---0655, pg--0064 |
-- |
2005.06.10 |
B2001-9-A01 |
503L14 |
AP009018 |
142,525 |
6 |
KAIKObase |
-- |
NV060729, wdS20024 |
-- |
2005.06.10 |
B2002-9-A01 |
504B24 |
AP009019 |
155,170 |
24 |
KAIKObase |
-- |
prgv0215, e96h0982, br--0661, wdS00141, wdS00966 |
-- |
2005.06.10 |
B2003-9-A01 |
510L24 |
AP009020 |
104,504 |
19 |
KAIKObase |
egg specific protein |
wdS20154 |
-- |
2005.06.10 |
B2004-9-A01 |
513O16 |
AP009021 |
155,825 |
22 |
KAIKObase |
PTTH |
mg--0582, mg--0822 |
-- |
2005.06.10 |
B2005-9-A01 |
513P13 |
AP009022 |
145,045 |
25 |
KAIKObase |
SP-1 |
-- |
-- |
2005.06.10 |
B2006-9-A01 |
514H01 |
AP009023 |
140,907 |
14 |
KAIKObase |
Fib-L |
-- |
-- |
2005.06.10 |
B2007-9-A01 |
514J13 |
AP009024 |
106,631 |
10 |
KAIKObase |
-- |
wdS00830, wdS20033, wdS20096, NV021922 |
-- |
2005.06.10 |
B2008-9-A01 |
515H16 |
AP009025 |
111,903 |
10 |
KAIKObase |
-- |
prgv0251, msgV0471, N---0013, wdS00227, fbpv0939 |
-- |
2005.06.10 |
B2009-9-A01 |
516O13 |
AP009026 |
112,414 |
25 |
KAIKObase |
-- |
NV060052, fbpv0246, msgV0173, N---1084, fbpv0897 |
-- |
2005.06.10 |
B2010-9-A01 |
517G19 |
AP009027 |
157,022 |
5 |
KAIKObase |
Actin A3, A4 |
wdS0344, NV021119, NV060463, fbpv0727, e40h0198 |
-- |
2005.06.10 |
B2011-9-A01 |
519F15 |
AP009028 |
176,330 |
4 |
KAIKObase |
-- |
N---0567, NV060215, NV021147, e40h0147 |
-- |
2005.06.10 |
B2012-9-A01 |
520F12 |
AP009029 |
117,574 |
5 |
KAIKObase |
-- |
msgV0331, fbpv0469, NV060186, NV060453, N---0965 |
-- |
2005.06.10 |
B2013-9-A01 |
523E11 |
AP009030 |
157,347 |
8 |
KAIKObase |
-- |
wdS00875, NV021339 |
-- |
2005.06.10 |
B2014-9-A01 |
526E16 |
AP009031 |
110,996 |
2 |
KAIKObase |
P25 |
-- |
-- |
2005.06.10 |
B2015-9-A01 |
528K11 |
AP009032 |
130,115 |
3 |
KAIKObase |
-- |
N---1035, msgV0022, N---0104, NV060218, e96h0808,wdS20421 |
-- |
2005.06.10 |
B2016-9-A01 |
532O09 |
AP009033 |
133,041 |
15 |
KAIKObase |
-- |
N---0090, N---0248 |
-- |
2005.06.10 |
B2017-9-A01 |
533C16 |
AP009034 |
150,343 |
12 |
KAIKObase |
-- |
br--0911, mg--0651, N---1017, wdS00483, NV021843, prgv0130 |
-- |
2005.06.10 |
B2018-9-A01 |
534E24 |
AB159447 |
124,898 |
13 |
KAIKObase |
Supercoiling Factor |
wdS00199, NV060283, prgv0216, NV060334 |
-- |
2005.06.10 |
B2019-9-A01 |
535J11 |
AP009035 |
115,715 |
18 |
KAIKObase |
-- |
prgv0238, prgv0272 |
-- |
2005.06.10 |
B2020-9-A01 |
536D15 |
AP009036 |
152,645 |
15 |
KAIKObase |
G-tRNA synthase, fbpv0128 |
N---0908, pg--0021, wdS00081, wdS20064, N---0704 |
-- |
2005.06.10 |
B2021-9-A01 |
543G13 |
AP009037 |
143,809 |
27 |
KAIKObase |
-- |
br--0464, wdS00742 |
-- |
2005.06.10 |
B2023-9-A01 |
544H24 |
AB159445 |
205,107 |
2 |
KAIKObase |
even-skipped |
-- |
-- |
2005.06.10 |
B2024-9-A01 |
544I15 |
AP009038 |
134,565 |
12 |
KAIKObase |
e96h0285 |
e40h0154, NV060251, NV060730, wdS20365, N---0664, NV021976 |
-- |
2005.06.10 |
B2025-9-A01 |
550L16 |
AP009039 |
131,062 |
6 |
KAIKObase |
-- |
msgV0015 |
-- |
2005.06.10 |
B2026-9-A01 |
551F24 |
AP009040 |
113,977 |
5 |
KAIKObase |
-- |
ceN-0060, wdS20512, N---0022, N---0980, NV060228, prgv0037 |
-- |
2005.06.10 |
B2027-9-A01 |
556I11 |
AP009041 |
123,910 |
18 |
KAIKObase |
-- |
wdS00784, NV060801, N---0570 |
-- |
2005.06.10 |
B2028-9-A01 |
559G11 |
AB159446 |
149,562 |
11 |
KAIKObase |
bombyxin |
N---0627, NV060365 |
-- |
2005.06.10 |
B2029-9-A01 |
009O16 |
AP008999 |
155,000 |
26 |
KAIKObase |
-- |
prgv0044, NV021855, wdS00464, msgV0441 |
-- |
2005.06.10 |
B2030-9-A01 |
019F14 |
AP009006 |
193,330 |
1 |
KAIKObase |
period |
-- |
-- |
2005.06.10 |
B2031-9-A01 |
004E23 |
AP008995 |
200,069 |
15 |
KAIKObase |
Succinyl-CoA ligase alpha-chain |
mg--0298 |
-- |
2005.06.10 |
B2032-9-A01 |
001D20 |
AP008992 |
185,921 |
11 |
KAIKObase |
unknown |
msgV0666 |
-- |
2005.06.10 |
B2035-9-A01 |
024J19 |
AP009009 |
201,274 |
4 |
KAIKObase |
Dm CG31712 |
e40h0009 |
-- |
2005.06.10 |
B2036-9-A01 |
041P16 |
AP009013 |
131,526 |
4 |
KAIKObase |
snRNP protein B (splicing protein) |
wdV30204 |
-- |
2005.06.10 |
B2037-9-A01 |
023I19 |
AP009008 |
184,971 |
4 |
KAIKObase |
Dm TCTP |
heS00290 |
-- |
2005.06.10 |
B2038-9-A01 |
001F15 |
AP008993 |
167,915 |
7 |
KAIKObase |
v-ATPase E |
wdS00213 |
-- |
2005.06.10 |
B2039-9-A01 |
006H21 |
AP008996 |
198,626 |
8 |
KAIKObase |
Dm CG8877 (splicing factor) |
cesb0094 |
-- |
2005.06.10 |
B2040-9-A01 |
032I22 |
AP009010 |
187,609 |
21 |
KAIKObase |
Tubulin alpha |
wdV40225 |
-- |
2005.06.10 |
B2041-9-A01 |
007M11 |
AP008997 |
152,312 |
4 |
KAIKObase |
Cytochrome B5 |
pg--0097 |
-- |
2005.06.10 |
B2042-9-A01 |
022F01 |
AP009007 |
164,370 |
12 |
KAIKObase |
no homology |
heS30286 |
-- |
2005.06.10 |
B2043-9-A01 |
014E18 |
AP009001 |
173,544 |
20 |
KAIKObase |
40S Ribosomal protein S20 |
wdV30406 |
-- |
2005.06.10 |
B2044-9-A01 |
047D02 |
AP009014 |
195,130 |
5 |
KAIKObase |
3-hybroxyacyl-CoA dehybrogenase |
wdV30131 |
-- |
2005.06.10 |
B2047-9-A01 |
039G04 |
AP009012 |
189,638 |
14 |
KAIKObase |
Ribosomal protein S16 |
heS00795 |
-- |
2005.06.10 |
B2048-9-A01 |
048C11 |
AP009015 |
149,153 |
17 |
KAIKObase |
unknown |
ce--1103 |
-- |
2005.06.10 |
B2049-9-A01 |
018H08 |
AP009005 |
160,814 |
21 |
KAIKObase |
unknown |
msgV0326, br--0454 |
-- |
2005.06.10 |
B2050-9-A01 |
009K19 |
AP008998 |
236,919 |
25 |
KAIKObase |
C.ele hypothetical protein K08H10.9 |
prgv0769 |
-- |
2005.06.10 |
B2051-9-A01 |
037E23 |
AP009011 |
191,091 |
24 |
KAIKObase |
Ferritin H-chain |
brP-1100 |
-- |
2005.06.10 |
S2046-9-A01 |
014M12 |
AP009002 |
185,060 |
9 |
KAIKObase |
-- |
wdS20405 |
Contig5196 |
2005.06.10 |
S2052-9-A01 |
017C14 |
AP009004 |
188,146 |
9 |
KAIKObase |
-- |
wdS20072 |
Singleton |
2005.06.10 |
S2053-9-A01 |
012P08 |
AP009000 |
195,041 |
20 |
KAIKObase |
-- |
e40H0739 |
Contig4116 |
2005.06.10 |
S2054-9-A01 |
003L20 |
AP008994 |
155,325 |
24 |
KAIKObase |
-- |
wdV40143 |
Contig543 |
2005.06.10 |
S2056-9-A01 |
015K14 |
AP009003 |
180,598 |
24 |
KAIKObase |
-- |
e96h0228 |
Singleton |
2005.06.10 |
S2057-9-A01 |
060O24 |
AP009016 |
222,411 |
20 |
KAIKObase |
-- |
heS00927, heS30603 |
Contig4116 |
2005.06.10 |
S2058-9-A01 |
Remarks;
* Derived from EST hybridization experimental data
** Constructed by BAC fingerprinting
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