Gene No. : 532O09.AutoPredgene16


Location
Chromosome BAC53
Clone Name532O09
Positon78897..80076 , 80322..82987
Direction+
C+G% Content56.04 %

Search Results [A]:Alignment
Blastn
[db:nt]
waiting Blastn
Blastp
[db:nr]
gi|474339|gb|AAA17752.1| reverse transcriptase [Bombyx mori]         1212   0.0        [A]
gi|4521269|dbj|BAA76304.1| endonuclease and reverse transcriptas...  1207   0.0        [A]
gi|12698289|dbj|BAB21761.1| polyprotein [Bombyx mori]                1196   0.0        [A]
gi|3859942|gb|AAC72921.1| putative endonuclease/reverse transcri...   792   0.0        [A]
gi|3859938|gb|AAC72919.1| reverse transcriptase [Lymantria dispar]    431   e-118      [A]
gi|419955|pir||S31175 hypothetical protein 2 - midge (Chironomus...   392   e-107      [A]
gi|7327281|gb|AAB26437.2| reverse transcriptase homolog [Chirono...   390   e-106      [A]
gi|1362627|pir||S55543 RNA-directed DNA polymerase (EC 2.7.7.49)...   379   e-103      [A]
gi|16648424|gb|AAL25477.1| LD46618p [Drosophila melanogaster]         377   e-102      [A]
gi|12698290|dbj|BAB21762.1| gag-like protein [Bombyx mori]            375   e-102      [A]
HMMER
[db:Pfam]
RVT_1          Reverse transcriptase (RNA-dependent D   219.2    6.2e-62   1           [A]
PRE_C2HC       Associated with zinc fingers              75.2    1.3e-18   1           [A]
Exo_endo_phos  Endonuclease/Exonuclease/phosphatase f    59.6    6.5e-14   1           [A]
ProfileScan
[db:prosite]
 12.533     67 pos.    259 -   341 PS50099|PRO_RICH Proline-rich region profile.       [A]
  8.809     46 pos.   1266 -  1279 PS50323|ARG_RICH Arginine-rich region profile.      [A]

Analysis of Amino Acid Sequence
PSORT
SOSUI
MOTIF

Sequence
Nucleotide Sequence
Spliced Nucleotide Sequence
Translated Protein Sequence